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AnyGenes

WHAT ARE HOUSEKEEPING GENES?

Reference genes, also known as housekeeping genes, are essential for accurate gene expression analysis, as they provide stable expression levels across various experimental conditions. They are crucial for normalization in quantitative PCR (qPCR) and other gene expression techniques, enabling researchers to accurately interpret data by correcting for sample variability. Without appropriate housekeeping genes, the reliability of gene expression results can be compromised, leading to potential misinterpretation of data.

AnyGenes offers optimized qPCR arrays designed for effective normalization in gene expression studies, providing carefully validated reference gene panels tailored to diverse research needs. These arrays allow scientists to obtain more robust and reproducible data, reducing technical variation and enhancing overall confidence in gene expression findings. With AnyGenes’ specialized products, researchers can select and validate the most stable reference genes for their specific applications, advancing the quality of their gene expression research.

Reference genes analyzed using AnyGenes qPCR array.

SELECTING RELIABLE REFERENCE GENES

Selecting suitable housekeeping genes requires careful consideration of the experimental context. Ideal housekeeping genes should exhibit minimal variability in expression across different cell types, tissues, and experimental treatments. Commonly used genes for normalization include GAPDH (Glyceraldehyde-3-Phosphate Dehydrogenase), (Beta-Actin), and B2M (β2 microglobulin), though no single gene is universally suitable. For more precise results, multiple housekeeping genes are often recommended to increase accuracy.

APPLICATION OF HOUSEKEEPING GENES IN qPCR AND GENE EXPRESSION

In qPCR and gene expression analysis, housekeeping genes are used to normalize the amount of RNA or DNA in each sample, ensuring accurate quantification of target gene expression. This normalization is critical to account for variations in sample quantity and quality.

By comparing the expression levels of target genes to those of housekeeping genes, researchers can obtain relative expression values that reflect true biological changes. This approach is essential for studying gene regulation, cellular responses to stimuli, and the effects of genetic modifications.

CHALLENGES AND CONSIDERATIONS IN SELECTING HOUSEKEEPING GENES

When selecting a housekeeping gene, consider the following factors:

  • Expression Stability: Analyze the expression levels of potential reference genes across your specific sample types and experimental conditions.
  • Experimental Design: Ensure that the chosen reference gene is suitable for the biological context of your study.

Researchers must validate housekeeping genes for each specific experiment, considering factors such as tissue type, treatment conditions, and experimental design.

APPLICATIONS OF REFERENCE GENES IN RESEARCH 

Housekeeping genes are applied across numerous research areas, including cancer biology, immunology, and developmental studies, where accurate gene expression measurements are critical. By ensuring consistent data interpretation, reference genes contribute significantly to advancements in biomarker discovery, drug development, and understanding of disease mechanisms.

(1) Joshi CJ, et al. What are housekeeping genes? PLoS Comput Biol. (2022)13;18(7):e1010295.
(2) da Conceição Braga L, et al. Identification of best housekeeping genes for the normalization of RT-qPCR in human cell lines. Acta Histochem. (2022);124(1):151821.
(3) Curis E, et al. Selecting reference genes in RT-qPCR based on equivalence tests: a network based approach. Sci Rep. (2019)7;9(1):16231.
 

REFERENCE GENES BIOMARKER LIST

Customize your own signaling pathways (SignArrays®) with the factors of your choice!
Simply download and complete our Personalized SignArrays® information file and send it at contact@anygenes.com to get started on your project.

You can check the biomarker list included in this pathway, see below:
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